FACS Data Transformer
Transforms gating exports into melted X/Y tables for analysis.
Purpose-built lab scripts that turn messy workflows into repeatable runs.
A personal toolkit for imaging, sequencing, and data cleanup. Built for speed in the lab and clarity for collaborators.
10
Tool categories
12+
Scripts versioned + curated
Fast setup
Python-first workflows
Featured tools
ImageMerger
Builds image grids from BE layouts with labels and fast output.
MultiCropper
Select once, crop a whole image set with consistent bounds.
Sequence Chopper
Splits long DNA strings into primer-friendly chunks.
sgRNA Primer Bulk
Bulk-generate oligos from Excel sequence lists.
SlidesMiner
Extracts slide changes from screen recordings and builds PDFs.
Obsidian Lab Template
Templater + Dataview setup for experiment, daily, and milestone notes.
Keyence Macros
HTS macro files for plate capture when autofocus is unreliable.
Why this repo
Real lab context
Each script was built to solve a real workflow bottleneck.
Reusable patterns
Clean inputs, predictable outputs, and reproducible results.
Easy to adopt
Quick to scan, easy to demo, and documented with examples.